ProteoVision™: Visualizing proteomics data with ease

Effortlessly transform complex proteomics data into clear, insightful & standardized visualizations – fast, free, and easy to use!

The challenge:

Mass spectrometry (MS)-based proteomics goes beyond raw data acquisition – processing and visualization are crucial for meaningful insights. However, these steps can be complex, time-consuming, and challenging for many researchers.

The solution:

ProteoVision™, a prototype* software, streamlines proteomics data analysis with just a few clicks. It provides comprehensive visualizations of data breadth, depth, completeness, overlap, reproducibility, and more – quick, easy, and completely free.

*please see license agreement for details

Apply! Simple, streamlined workflows

1. Sample
Samples should be liquid, homogenates or a soft pellet.
2. Lyse, reduce, alkylate
Add LYSE reagent, and incubate for 10 mins at 95°C.
3. Digest
Cool, add DIGEST reagent, and incubate for 60 mins at 37°C.
4. Purify
Load onto cartridge, WASH and ELUTE. Dry and resuspend in LOAD.
5. MS measurement
Inject and analyze to see improved peptide identities.
6. Data analysis
Analyze your MS data with ProteoVision™

Results

Data visualization simplified

ProteoVision™ is an intuitive software tool designed to process and visualize proteomics data using standardized workflows. Supporting a wide range of search engines, it effortlessly converts search results into clear, informative plots. These include protein and peptide identifications, detection completeness, sample overlap and reproducibility, and LC-MS quality metrics.

Optimized for plasma proteomics, ProteoVision™ also automates plasma-specific analysis by detecting potential contaminations and assessing proteome coverage. Leveraging data from the Human Protein Atlas, it accelerates and simplifies interpretation – making data analysis faster and more accessible.

Fig. 1.: Example for the visualization of protein detection completeness ​by ProteoVision™

Data visualization simplified

ProteoVision™ is an intuitive software tool designed to process and visualize proteomics data using standardized workflows. Supporting a wide range of search engines, it effortlessly converts search results into clear, informative plots. These include protein and peptide identifications, detection completeness, sample overlap and reproducibility, and LC-MS quality metrics.

Optimized for plasma proteomics, ProteoVision™ also automates plasma-specific analysis by detecting potential contaminations and assessing proteome coverage. Leveraging data from the Human Protein Atlas, it accelerates and simplifies interpretation – making data analysis faster and more accessible.

PreOmics®'

ProteoVision™

values

Smile

  • Visualize your proteomics data effortlessly – fast, clear, and free
  • Intuitive tool for complex data
  • Quick insight into depth, overlap & reproducibility
  • Plasma-specific QC: contamination & protein levels
  • Works with DIA-NN, Spectronaut®, MaxQuant® & more
  • 100% free to use

Relax

  • Skip the hassle – ProteoVision™ does the heavy lifting
  • No coding, no format conversion
  • Auto-merges multiple search outputs
  • Compatible with *.txt, *.tsv and *.parquet formats
  • Plots ready for publication in minutes
  • DIA-focused, flexibly adaptable

Realize

  • Unlock deeper insights and boost your workflow quality
  • Standardized data evaluation
  • Fast LC-MS troubleshooting
  • Plasma QC metrics built-in
  • Supports CQE with expected fold change
  • Ready for ENRICH technology for smoother plasma analysis

ProteoVision™

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ProteoVision™

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Instrument
Instrument
Effortlessly transform complex proteomics data into clear, insightful & standardized visualizations – fast, free, and easy to use!

ProteoVision™

Request quote
Instrument
Instrument
Effortlessly transform complex proteomics data into clear, insightful & standardized visualizations – fast, free, and easy to use!

ProteoVision™

Request quote
Instrument
Instrument
Effortlessly transform complex proteomics data into clear, insightful & standardized visualizations – fast, free, and easy to use!
Request quote
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